Files that were created for this project.  All files ending with a pro extension are IDL programs, and if they end with a .m extension, then it is a MATLAB file.   Very little information will be given here because most of these functions are application specific and there is nothing general about them.
 
 
 

cut.pro	takes an input array and cuts out hard-wired sections.  It also uses the following zero function, and smoothes the image.
zero.pro	zeros out the background , or makes all values less than the greatest value in a region 10,10:10,10 equal to zero
pinv.pro	finds the pseudo-inverse of a matrix
diag.pro	takes a single column matrix and makes it a diagonal matrix
readmri.pro	reads in MR images, or any image in a raw format with no header.  (automatically swaps bytes)
writemri.pro	writes out binary data, only writes integer values
autocut.pro	an example of mass production on the image set.  This was done to avoid typing things over and cuts out a portion of an image
demodeim.m	DECRA algorithm in MATLAB
readimag.m	read im .skw images in MATLAB
auto2.m	Automatically reads in 15 .sk files with fixed names